Information for 12-CCRTCAGCGSMACATT (Motif 18)

A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
Reverse Opposite:
G T C A C G T A C G A T A C T G A G C T A C G T T A C G A G T C T C A G G T A C A C G T A C T G C G T A A G C T C A T G A C T G
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.650
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.5 +/- 12.6bp
Average Position of motif in Background55.8 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCRTCAGCGSMACATT
CCAATCAA---------
 A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCRTCAGCGSMACATT
SCTGTCARCACC-----
 A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCRTCAGCGSMACATT
GGCCATTAAC--------
 A C G T A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCRTCAGCGSMACATT
CAATCACTGGCAGAAT
 A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCRTCAGCGSMACATT
GCTGTCAA---------
 A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCRTCAGCGSMACATT
--GTCAGCANNTN---
 A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCRTCAGCGSMACATT
SCTGTCAVTCAV---------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCRTCAGCGSMACATT
--GTCATN--------
 A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCRTCAGCGSMACATT
CGACCCAATCAACGGTG----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.49
Offset:-8
Orientation:forward strand
Alignment:--------CCRTCAGCGSMACATT
AAATGGACCAATCAG---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C T C G A A C G T T A G C G T C A C A T G A G T C T C A G A T G C G T C A C T G A T A G C G C T A A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T