Information for 5-SYYCCAAAACCTCAGG (Motif 4)

A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C T G A C T G C T G A C T A G A T C G
p-value:1e-13
log p-value:-3.175e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 19.4bp
Average Position of motif in Background38.6 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:SYYCCAAAACCTCAGG-
------AAACCACAGAN
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG
-----NAAACCACAG-
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG
------AAACCACANN
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:SYYCCAAAACCTCAGG
------AAACCACAGC
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG--
-------AGCCTCAGGCA
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:SYYCCAAAACCTCAGG----
--------GCCTCAGGGCAT
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.62
Offset:8
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG----
--------SCCTSAGGSCAW
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG--
-------CGCCTCAGGCA
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG-
-----NWAACCACADNN
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:SYYCCAAAACCTCAGG
------AAACCGCAA-
 A T G C A G T C A G C T A G T C G T A C T C G A C G T A C G T A T C G A A G T C A G T C G A C T A G T C C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T