Information for 11-CAGGCTACTA (Motif 38)

A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.437e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 23.6bp
Average Position of motif in Background47.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTA-----
ACATGCTACCTAATAC
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTA-----
ACTTGCTACCTACACC
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGGCTACTA-
AAGGCAAGTGT
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTA-----
CNNNGCTACTGTANNN
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTA
BCAGACWA---
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGGCTACTA
GTGCCACGCGACTG
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTA-----
TNNTGCTACTGTNNNN
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGGCTACTA
--NGCTN---
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCTACTA
CACAGN------
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTA----
AGATGCTRCTRCCHT
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T