Information for 2-GCCCCCTAGTGGCCAK (Motif 2)

C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
Reverse Opposite:
T G A C C G A T A C T G T C A G A G T C A G T C G T C A A G T C G A C T C T G A A C T G C T A G C A T G A C T G A C T G G A T C
p-value:1e-39
log p-value:-9.089e+01
Information Content per bp:1.755
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.1 +/- 15.4bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTAGTGGCCAK
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCTAGTGGCCAK
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.85
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTAGTGGCCAK
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCCCTAGTGGCCAK
CCCCCCCGGGGGNN--
 C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCCCTAGTGGCCAK
CCCCCCCGGGGGGGT--
 A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGTGGCCAK
GGCACCCAGGGGTGC-
 C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTAGTGGCCAK
ACCCCCCCGGGGGGN--
 A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCTAGTGGCCAK
GGTCCCGCCCCCTTCTC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCCCCTAGTGGCCAK
GACCCCCCGCTGTGC--
 A C G T C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCCCCTAGTGGCCAK---
--NNANTGGTGGTCTTNNN
 C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A C T G A C G T A C T G A C T G A G T C T G A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G