Information for 13-MKCMTKSYSYKCTGGM (Motif 16)

G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A T C G G T C A C T G A A T C G C T A G A T C G G T A C C G T A A C T G A C T G G T C A A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.765
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets34.8 +/- 23.8bp
Average Position of motif in Background46.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:MKCMTKSYSYKCTGGM--
--------GGTCTGGCAT
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.55
Offset:11
Orientation:forward strand
Alignment:MKCMTKSYSYKCTGGM-
-----------TTGGCA
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:MKCMTKSYSYKCTGGM---
----------NTTGGCANN
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-MKCMTKSYSYKCTGGM
NNTCCTGCTGTGNNN--
 A C G T G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-MKCMTKSYSYKCTGGM
TNTCCTGCTGTGNNG--
 A C G T G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-MKCMTKSYSYKCTGGM
NGTCACGCTTGGCTGC-
 A C G T G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:MKCMTKSYSYKCTGGM
GTCATGCHTGRCTGS-
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-MKCMTKSYSYKCTGGM
TCNCCTGCTGNGNNN--
 A C G T G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:MKCMTKSYSYKCTGGM---
--CCNNACCATCTGGCCTN
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:MKCMTKSYSYKCTGGM-
----TGCCCTGAGGGCA
 G T A C A C G T A G T C G T A C A C G T C A T G A T G C A G T C A T G C A G C T A C G T A T G C A C G T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A