Information for 12-CCTACYCAGTSAGGCA (Motif 15)

A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A
Reverse Opposite:
A C G T A C T G A T G C A T G C A C G T A T G C C T G A A G T C A C G T T C A G C T G A A C T G G C A T T C G A A C T G A T C G
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 26.7bp
Average Position of motif in Background67.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA----
-----SCAGYCADGCATGAC
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.52
Offset:10
Orientation:forward strand
Alignment:CCTACYCAGTSAGGCA-----
----------AAGGCAAGTGT
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA
--TGCTGASTCAGC--
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCTACYCAGTSAGGCA---
GCCTCCTCCMTCWGACTGKS
 A C G T A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA--
---TCCCAGMCRAGCCCC
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA
-NTGCTGAGTCATCCN
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A
A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA
---------TGAGTCA
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA-
---------BCAGACWA
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CCTACYCAGTSAGGCA--------
----------CAGGCCNNGGCCNN
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:11
Orientation:forward strand
Alignment:CCTACYCAGTSAGGCA---
-----------AGGCCTNG
 A T G C T G A C A G C T C G T A A G T C A G C T A G T C G T C A T C A G G A C T A T C G C G T A A T C G T A C G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G