Information for 4-TTCCTCTAAGACT (Motif 5)

A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A G T C A C G T A C G T C T G A A C T G C G T A A C T G A T C G C G T A G T C A
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 20.4bp
Average Position of motif in Background60.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCCTCTAAGACT
TTCCTCT------
 A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTCTAAGACT
NNNTTTCCTGGAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTCCTCTAAGACT
CACTTCCTCT------
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCCTCTAAGACT
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTCTAAGACT
NNACTTCCTCTTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCCTCTAAGACT-
CTTTCANTATGACTV
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTCTAAGACT
TTTCCTGGAAA---
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTCTAAGACT
NNNATTCCTCGAAAGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTCTAAGACT
NCTTCCNGGAAGNN-
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCCTCTAAGACT
NTTTCCNGGAAA---
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G T C A G C T G T C A C G T A A C T G C G T A A G T C A G C T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T