Information for 21-TGTTGTTAGGAAA (Motif 35)

A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G T A A G T C C G T A C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.241e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 15.1bp
Average Position of motif in Background29.5 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTTGTTAGGAAA--
KGTTGCTAGGMAACA
 A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTAGGAAA-
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTTGTTAGGAAA
--TTCTNMGGAA-
 A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGTTAGGAAA
CTGTTGCTAGGS--
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTGTTAGGAAA--
ANTTCTCAGGAANNN
 A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTTGTTAGGAAA-
--TTCTNNAGAANT
 A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTTGTTAGGAAA-----
--AAGATCGGAANTNNNA
 A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTTAGGAAA
GTNTTGTTGTGANNT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TGTTGTTAGGAAA----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTAGGAAA
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A C G T A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A