Information for 2-AMCAAATGATGTG (Motif 3)

C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C G T A A C G T A G T C C G T A C G A T A C G T A C G T C T A G C A G T A G C T
p-value:1e-16
log p-value:-3.814e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.7 +/- 25.9bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OLIG1/MA0826.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AMCAAATGATGTG
AACATATGTT---
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AMCAAATGATGTG
AACAGATGGTCN-
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AMCAAATGATGTG--
GAACAATTGCAGTGTT
 A C G T C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMCAAATGATGTG
NAACATATGTTT--
 A C G T C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AMCAAATGATGTG
ACCATATGTT---
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AMCAAATGATGTG
ACCATATGGT---
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AMCAAATGATGTG--
AACAATTTCAGTGTT
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AMCAAATGATGTG-----
-NNCTTTGTTTTGNTNNN
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AMCAAATGATGTG
ACCATATGTT---
 C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AMCAAATGATGTG---
NNNNNATTGATGNGTGN
 A C G T C T G A G T A C A G T C G T C A C G T A C G T A A C G T A C T G G T C A A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A