Information for 13-TAAAGCACTTTTC (Motif 22)

A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A T C G A C G T A C G T A A C T G A C G T A C T G A T G C A C G T C G A T A C G T C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.5 +/- 17.1bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAAAGCACTTTTC
--AAGCACTTAA-
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAAGCACTTTTC--
CCTTGCAATTTTTNN
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGCACTTTTC-
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGCACTTTTC-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAAGCACTTTTC-
CTTTAAGTACTTAATG
 A C G T A C G T A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAAAGCACTTTTC----
----GCACGTGTCNNNN
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TAAAGCACTTTTC
---ACCACTTGAA
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAAGCACTTTTC---
CATAACCACTTAACAAC
 A C G T A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAAAGCACTTTTC
---ACCACTTAA-
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAAAGCACTTTTC
--MRSCACTYAA-
 A C G T C G T A C G T A C G T A A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A G T C
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T