Information for 12-CMGCAGWCGCSMG (Motif 21)

A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
Reverse Opposite:
A G T C A C T G A T C G A C T G A G T C A C T G C G T A A T G C A C G T A C T G A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 20.8bp
Average Position of motif in Background74.7 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CMGCAGWCGCSMG
--CCAGACRSVB-
 A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CMGCAGWCGCSMG
-CGCAGCTGCG--
 A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CMGCAGWCGCSMG
TGCGCAGGCGC---
 A C G T A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CMGCAGWCGCSMG
--CCAGACAG---
 A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CMGCAGWCGCSMG
AGCAACAGCCGCACC
 A C G T A C G T A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CMGCAGWCGCSMG
NCGCGGACGTTG-
 A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CMGCAGWCGCSMG
AGCAGCTGCTNN---
 A C G T A C G T A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CMGCAGWCGCSMG
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CMGCAGWCGCSMG
TGCAGCTGTCCCT--
 A C G T A C G T A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CMGCAGWCGCSMG
SDGCAGGTGCNS-
 A G T C G T C A A C T G A G T C C G T A A T C G C G A T A G T C A C T G A G T C T A G C G T A C A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T