Information for 5-GGCTTCAAAG (Motif 18)

A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G
Reverse Opposite:
A T G C A G C T A G C T A C G T A C T G T C G A C G T A A C T G G A T C A G T C
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.836
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif158.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets60.6 +/- 30.8bp
Average Position of motif in Background49.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCAAAG
CGGTTTCAAA-
 A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGCTTCAAAG-
-ACATCAAAGG
 A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGCTTCAAAG-
-ACWTCAAAGG
 A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCAAAG---
AAAGATCAAAGGAA
 A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCTTCAAAG---
-ACATCAAAGGNA
 A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCTTCAAAG
-NATTCAAAT
 A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCTTCAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCTTCAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTCAAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCAAAG----
AGAGTCCAAAGTCCA
 A C G T A C T G C T A G G T A C A C G T A G C T G T A C C G T A C T G A C T G A T A C G A C G T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A