Information for 4-CMATTTGGAT (Motif 17)

T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T
Reverse Opposite:
G C T A A G C T A T G C A G T C G T C A C G T A C T G A C G A T C A T G A T C G
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.607
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif922.6
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets57.1 +/- 25.9bp
Average Position of motif in Background50.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CMATTTGGAT--
--ATTTGCATAT
 T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CMATTTGGAT--
TTCATTTGCATAT
 A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CMATTTGGAT--
--ATTTGCATAA
 T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CMATTTGGAT
RCCATMTGTT-
 A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CMATTTGGAT
CCATATGT--
 T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CMATTTGGAT--
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CMATTTGGAT
ACCATATGGT-
 A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CMATTTGGAT----
TNTAATTTGCATACNA
 A C G T A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CMATTTGGAT----
TNTAATTTGCATACNA
 A C G T A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CMATTTGGAT----
TNTAATTTGCATANNN
 A C G T A C G T T A G C G T A C G C T A G A C T G C A T A C G T C T A G T A C G T C G A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A