Information for 10-TGTCCTGTATTTAACT (Motif 16)

A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T
Reverse Opposite:
C G T A C T A G C G A T G A C T C G T A C G T A T C G A C G A T C T G A G A T C C G T A A C T G A T C G G C T A T A G C G T C A
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.719
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 22.9bp
Average Position of motif in Background53.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGTATTTAACT-
TGACCTTTANTTGACCT
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGTATTTAACT-
TGACCTTTGCATGACCT
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGTATTTAACT-
BTGACCTCTNNHTGACCY
 A C G T A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGTATTTAACT
TGACCTTGAT------
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGTCCTGTATTTAACT---
TGACCTAAAGTAACCTCTG
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGTATTTAACT
TTGACCTANTTATN---
 A C G T A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGTCCTGTATTTAACT
TGACCTTTNCNT----
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGTCCTGTATTTAACT----
-----TGTAATTAATTATGG
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGTCCTGTATTTAACT
---GCTATTTTTAGC-
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTCCTGTATTTAACT-----
----ACTTAGTTAACTAAAAA
 A C G T A T C G C G A T A T G C G T A C A C G T C A T G A G C T C G T A A G C T G A C T A C G T C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A