Information for 9-GAGTGGGGCAAGTGCA (Motif 15)

A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C C G T A A G T C A G C T C G A T A C T G A G T C A G T C A G T C A G T C C G T A A T G C C G A T A G T C
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 17.8bp
Average Position of motif in Background66.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGTGGGGCAAGTGCA
----AAGGCAAGTGT-
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAGTGGGGCAAGTGCA
TGCGGAGTGGGACTGG----
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGTGGGGCAAGTGCA
--TAACGACACGTGC-
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGGGGCAAGTGCA
GGGGNGGGGC-------
 A C G T A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGGCAAGTGCA
TGGGTGGGGC-------
 A C G T A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAGTGGGGCAAGTGCA-
-----SDGCAGGTGCNS
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GAGTGGGGCAAGTGCA
------GACACGTGCC
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGGGCAAGTGCA
DGGGYGKGGC-------
 A C G T A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GAGTGGGGCAAGTGCA
------NTCAAGTGGN
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GAGTGGGGCAAGTGCA
------GACAGGTGTN
 A C T G C G T A A T C G C G A T A C T G C T A G A C T G C T A G A G T C C G T A C T G A T C A G A C G T T A C G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A