Information for 8-CCAACACTTTGAA (Motif 10)

A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
Reverse Opposite:
A G C T A C G T A G T C G T C A C G T A C G T A C A T G A C G T A C T G C G A T C G A T A C T G A C T G
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.5 +/- 17.1bp
Average Position of motif in Background47.5 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAACACTTTGAA
-MRSCACTYAA--
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAACACTTTGAA
--ACCACTTGAA-
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAACACTTTGAA
--ACCACTTAA--
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCAACACTTTGAA--
-----CCTTTGATGT
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCAACACTTTGAA
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAACACTTTGAA
--ACCACTTAA--
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCAACACTTTGAA
---CCACTTGAA-
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCAACACTTTGAA
---GCACTTAA--
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAACACTTTGAA
--GTCACGTGGM-
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCAACACTTTGAA--
---TNCCTTTGATGT
 A G T C A G T C C G T A C G T A A G T C C G T A G A T C A C G T A C G T A C G T A C T G G T C A C T G A A C G T A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T