Information for 5-CGMMCWCKGR (Motif 2)

A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G
Reverse Opposite:
A G T C G T A C G T C A T A C G G C T A C T A G A C G T A C T G A T G C T C A G
p-value:1e-21
log p-value:-4.900e+01
Information Content per bp:1.498
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif33.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.8 +/- 32.4bp
Average Position of motif in Background46.0 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGMMCWCKGR--
--CCTGCTGAGH
 A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGMMCWCKGR--
CGCCCCCTGACA
 A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGMMCWCKGR
GCCGCCATCTTG
 A C G T A C G T A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGMMCWCKGR----
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGMMCWCKGR----
TCNCCTGCTGNGNNN
 A C G T A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGMMCWCKGR-
-AACATCTGGA
 A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T
A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CGMMCWCKGR----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGMMCWCKGR--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGMMCWCKGR-
-GCCATCTGTT
 A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGMMCWCKGR------
CAATCACTGGCAGAAT
 A G T C T A C G T G A C T G C A G A T C C G A T A T G C C A G T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T