Information for 3-AAATGTTAGCATC (Motif 7)

C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
Reverse Opposite:
C T A G G T C A A C G T A T C G G T A C A G C T C G T A T C G A G A T C C G T A A C G T A G C T A C G T
p-value:1e-12
log p-value:-2.960e+01
Information Content per bp:1.787
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.4 +/- 21.2bp
Average Position of motif in Background42.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAATGTTAGCATC
CTATAATTGTTAGCG--
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAATGTTAGCATC
NNTNNCAATATTAG----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAATGTTAGCATC
NNTNNCAATATTAG----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAATGTTAGCATC---
--ATGATCGAATCAAA
 C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAATGTTAGCATC----
--ADGGYAGYAGCATCT
 C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAATGTTAGCATC
AAATCACAGCA--
 C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAATGTTAGCATC
AAAATTGTTATGAA-
 A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AAATGTTAGCATC---
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAATGTTAGCATC----
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAATGTTAGCATC--
WCATTTTGKCCTCYT
 C G T A C T G A G T C A A C G T C A T G A C G T C G A T C T G A C A T G A T G C G T C A A C G T A G T C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T