Information for 5-GCAGGKGGCAGCACCG (Motif 5)

A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
Reverse Opposite:
G T A C A C T G T A C G A C G T A T C G A G T C C G A T A C T G A G T C A T G C G T A C A G T C A G T C A C G T A T C G A T G C
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 17.8bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGKGGCAGCACCG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCAGGKGGCAGCACCG
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCAGGKGGCAGCACCG
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCAGGKGGCAGCACCG
-ADGGYAGYAGCATCT
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGGKGGCAGCACCG
CAAGATGGCGGC----
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCAGGKGGCAGCACCG
--TNNGGGCAG-----
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGKGGCAGCACCG
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCAGGKGGCAGCACCG
------GGGAGGACNG
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAGGKGGCAGCACCG
--GGTTGGCAT-----
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAGGKGGCAGCACCG
--NGTGGGCAT-----
 A T C G T A G C C G T A C T A G T C A G C A T G T A C G A C T G A G T C C G T A A C T G A T G C G T C A A G T C G T A C A C T G
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T