Information for 11-GCTATTAATA (Motif 38)

A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
p-value:1e-5
log p-value:-1.341e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 17.6bp
Average Position of motif in Background54.7 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCTATTAATA--
GCTATTTATAGC
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GCTATTAATA--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCTATTAATA--
-ATATTAATTAA
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCTATTAATA--
TCTATTTATAGN
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
TCTAAAAATAGA
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA--
GCTATTTTTAGC
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCTATTAATA-----
NAGCCATTAATTANTTA
 A C G T A C G T A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCTATTAATA-----
NAGCCATTAATTANTTA
 A C G T A C G T A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTATTAATA----
AATATTAATAAAGA
 A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCTATTAATA---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C A C G T G T C A A C G T A C G T C G T A G T C A A C G T C G T A A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T