Information for 17-AGTCAGGCATGCC (Motif 35)

C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
Reverse Opposite:
A C T G A C T G A T G C C G T A A C G T A C T G G T A C A G T C C G A T A C T G C T G A A G T C A C G T
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 11.5bp
Average Position of motif in Background50.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAGGCATGCC
SCAGYCADGCATGAC
 A C G T A C G T C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTCAGGCATGCC-
GCAGCCAAGCGTGACN
 A C G T A C G T C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTCAGGCATGCC-
NGCANTCATGCGTGACG
 A C G T A C G T A C G T C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX9/MA0781.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTCAGGCATGCC-
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGTCAGGCATGCC-
------ACATTCCA
 C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGTCAGGCATGCC
--CCWGGAATGY-
 C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGTCAGGCATGCC
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGTCAGGCATGCC
--CCWGGAATGY-
 C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTCAGGCATGCC
--CNAGGCCT---
 C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTCAGGCATGCC
GGTCTGGCAT---
 C G T A A C T G A G C T G T A C C G T A A C T G A C T G A G T C G T C A A C G T A T C G A G T C A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T