Information for 18-CTTTAAGGGGGTCAAC (Motif 30)

A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C G T C G T A C T G A C G T A C T A G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 23.9bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC---
--CTCCAGGGGTCAATTGA
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T A C G T A C G T
A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTAAGGGGGTCAAC---
--NTNNNGGGGTCANGNNN
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T A C G T A C G T
A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC
------AGRGGTCA--
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTTAAGGGGGTCAAC-
-NTNTGGGGGGTCNNNA
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T
A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC---
--GGCGAGGGGTCAAGGGC
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T A C G T A C G T
A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTTAAGGGGGTCAAC-
NNNATTGGGGGTNTCCT
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC---
--TTAAGGGGATTAACTAC
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T A C G T A C G T
A C G T A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC
-TATAAGTAGGTCAA-
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C
A C G T C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTTAAGGGGGTCAAC--
--CGCGCCGGGTCACGTA
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C A C G T A C G T
A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTAAGGGGGTCAAC
ATTTTNGGGGGGCNN-
 A G T C A C G T A G C T C G A T T G C A C G T A A C T G A C T G A C T G A C T G A C T G A C G T A G T C C G T A T G C A G T A C
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T