Information for 6-GTCGCATCTK (Motif 24)

C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T
Reverse Opposite:
T G C A T C G A C A T G G T C A A C G T C T A G A T G C A C T G C G T A G T A C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.730
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif230.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets44.1 +/- 27.8bp
Average Position of motif in Background51.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTCGCATCTK--
--CGCAGCTGCG
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTCGCATCTK--
--ACCATCTGTT
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCGCATCTK--
--AACATCTGGA
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCGCATCTK
ATTGCATCAK
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCGCATCTK----
--NVCAGCTGBBNN
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCATCTK-----
NNTNCGCACCTGTNGAN
 A C G T A C G T C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCGCATCTK--
--CGCACCTGCT
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCATCTK-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCGCATCTK
TTMACACCTT
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCGCATCTK
--ANCAGCTG
 C A T G G C A T G T A C A T C G A G T C C G T A A C G T G T A C A G C T A C G T
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G