Information for 13-CTKGMACTTAGCCAGG (Motif 17)

A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T C T A G A T C G A T G C A C G T T C G A G T C A A T C G A C G T A C T G G T A C G T A C G T C A A C T G
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.719
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.0 +/- 27.1bp
Average Position of motif in Background54.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTKGMACTTAGCCAGG
TTGGCANNNTGCCAAG
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTKGMACTTAGCCAGG
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTKGMACTTAGCCAGG
-TGGCAGNCTGCCAG-
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTKGMACTTAGCCAGG----
---GANGTTAACTAGTTTNN
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTKGMACTTAGCCAGG
-TGGCACCATGCCAA-
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.52
Offset:11
Orientation:forward strand
Alignment:CTKGMACTTAGCCAGG-----
-----------VCAGGTRDRY
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTKGMACTTAGCCAGG
---GCACTTAA-----
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTKGMACTTAGCCAGG-
--TGACANARRCCAGRC
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTKGMACTTAGCCAGG
GSCTGTCACTCA------
 A C G T A C G T A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:CTKGMACTTAGCCAGG
----------CACAGN
 A G T C A C G T A C T G A C T G T G A C T G C A T A G C A C G T A G C T G T C A T A C G T A G C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C