Information for 6-AYATGMAWACRTT (Motif 15)

C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
Reverse Opposite:
C G T A C G T A A G C T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C T A G C G A T
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 13.5bp
Average Position of motif in Background40.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AYATGMAWACRTT
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AYATGMAWACRTT
ATATGCAAAT---
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AYATGMAWACRTT
ATATGCAAATNNN
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AYATGMAWACRTT--
ATTTGCATACAATGG
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AYATGMAWACRTT
--ATGMATATDC-
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AYATGMAWACRTT
TTATGCAAAT---
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AYATGMAWACRTT
AAAATACATGTAAAAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AYATGMAWACRTT
-TATGCAAAT---
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AYATGMAWACRTT
AATATGCAAATT--
 A C G T C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AYATGMAWACRTT
--ATGAATATTC-
 C G T A A G T C C G T A A C G T A C T G G T A C C G T A C G A T G T C A A G T C C T G A A C G T C G A T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T