Information for 6-GHTCTGCTGCCAC (Motif 5)

A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C
Reverse Opposite:
A T C G C G A T A C T G A C T G A G T C C G T A A T C G A G T C G T C A A C T G G T C A C T G A G T A C
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.773
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif136.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets45.6 +/- 20.1bp
Average Position of motif in Background47.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GHTCTGCTGCCAC-
------TTGCCAAG
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GHTCTGCTGCCAC-
----TGCTGACTCA
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GHTCTGCTGCCAC-
-----CGTGCCAAG
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GHTCTGCTGCCAC--
------ATGCCAACC
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GHTCTGCTGCCAC
-------TGCCAA
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GHTCTGCTGCCAC--
-----GGTGCCAAGT
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GHTCTGCTGCCAC
AATTTGCTGAC--
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GHTCTGCTGCCAC-
----VGCTGWCAVB
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GHTCTGCTGCCAC-
--GGTGYTGACAGS
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GHTCTGCTGCCAC
AAAATGCTGACT-
 A C T G G A C T C A G T T G A C A C G T A C T G A T G C A C G T A C T G A G T C A G T C C G T A T A G C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T