Information for 7-KVWATTVHTC (Motif 10)

C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C
Reverse Opposite:
A C T G C G T A C G T A A C G T G T C A G T C A C G A T C G A T A T C G G T A C
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.566
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.58%
Number of Background Sequences with motif2269.9
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets49.4 +/- 28.4bp
Average Position of motif in Background50.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--KVWATTVHTC-----
AATCAATTGTTCCGCTA
 A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---KVWATTVHTC----
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:KVWATTVHTC
--AATTATT-
 C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--KVWATTVHTC----
NNTTTATTGTTCTNNN
 A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---KVWATTVHTC----
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--KVWATTVHTC----
AANTTATTGTTCTNNA
 A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-KVWATTVHTC------
NNNAATTAATCCCCNCN
 A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---KVWATTVHTC--
NNATNAATTGTTTNN
 A C G T A C G T A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KVWATTVHTC-----
TTCAATTGTTCTAAAA
 A C G T C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KVWATTVHTC--
-ATATTAATTAA
 C A T G T A C G G C T A G C T A C A G T C A G T T G C A G C A T C G A T T G A C A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A