Information for 7-ACARTGGCGCAGC (Motif 6)

C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C T C A G A G T C G T A C C G T A A G T C A C G T A T C G C G A T
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.1 +/- 21.4bp
Average Position of motif in Background45.2 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACARTGGCGCAGC
CTCACACAATGGCGC---
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACARTGGCGCAGC
VRAACAATGG------
 A C G T A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACARTGGCGCAGC
AACAAAGG------
 A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACARTGGCGCAGC-
CAGCATGACTCAGCA
 A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C A C G T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACARTGGCGCAGC
RAACAATGGN-----
 A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACARTGGCGCAGC
RACAAWGG------
 A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACARTGGCGCAGC
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACARTGGCGCAGC--
---ATGACTCAGCAD
 C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACARTGGCGCAGC
GAACAATGGN-----
 A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACARTGGCGCAGC
GAACAATGG------
 A C G T A C G T C G T A A T G C C G T A C T A G C G A T A C T G C T A G A G T C A C T G A G T C C G T A A C T G G T A C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T