Information for 20-TGTCCATGCG (Motif 28)

A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
Reverse Opposite:
A G T C C T A G A T G C T C G A A C G T C T A G A C T G C G T A A G T C C G T A
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.6 +/- 22.2bp
Average Position of motif in Background72.0 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCATGCG
BNTGDCCTTG--
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCATGCG
CTGTTCCTGG-
 A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTCCATGCG-
GTGCGCATGCGC
 A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCATGCG
CCTGTCAA----
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTCCATGCG-
CTGCGCATGCGC
 A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCATGCG
NTGTCAN----
 A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTCCATGCG
ATTTTCCATT--
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTCCATGCG
ATTTTCCATT--
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTCCATGCG---
---CCATGTGCTT
 A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTCCATGCG
TGTCTAGACG
 A C G T A C T G A C G T A G T C A G T C G T C A A C G T A T C G A G T C A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G