Information for 11-TTGGAAYCGCAAR (Motif 12)

A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
Reverse Opposite:
G A C T A G C T A C G T A C T G A T G C A C T G T C G A G A C T A C G T A T G C G T A C C G T A C G T A
p-value:1e-12
log p-value:-2.947e+01
Information Content per bp:1.727
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.4 +/- 29.2bp
Average Position of motif in Background28.0 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGGAAYCGCAAR
TTTGAAACCG---
 A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGGAAYCGCAAR
-TGGAACAGMA--
 A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGGAAYCGCAAR
ATTTGAATT-----
 A C G T A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTGGAAYCGCAAR
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGGAAYCGCAAR
TTGGCA-------
 A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAAYCGCAAR
NNTTGGCANN-----
 A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTGGAAYCGCAAR
AGATGCAATCCC---
 A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTGGAAYCGCAAR-
--GRAASTGAAAST
 A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTGGAAYCGCAAR
---AAACCGCAA-
 A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAYCGCAAR
NTTGGCANN-----
 A C G T A C G T A C G T C A T G A T C G C G T A C G T A A G C T A G T C T A C G T G A C G T C A C T G A C T G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T