Information for 4-CAATGGGTATTGT (Motif 5)

T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T
Reverse Opposite:
C G T A T G A C G T C A C G T A G C A T C G T A T G A C G T A C G T A C G C T A G A C T C G A T A C T G
p-value:1e-12
log p-value:-2.940e+01
Information Content per bp:1.547
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif13.54%
Number of Background Sequences with motif2685.6
Percentage of Background Sequences with motif5.70%
Average Position of motif in Targets47.7 +/- 28.4bp
Average Position of motif in Background50.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAATGGGTATTGT-
AACACTGCACATTGTT
 A C G T A C G T T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CAATGGGTATTGT
NNTNNACAATGGGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAATGGGTATTGT------
--ANNTCTATTGTTCNNNA
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CAATGGGTATTGT-
--------ATTGTT
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAATGGGTATTGT--------
TNNANNTCTATTGTTNTNNANN
 A C G T T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAATGGGTATTGT-
-----CTCATTGTC
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAATGGGTATTGT-------
---CNNNTATTGTTCNNNNN
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAATGGGTATTGT-
---TGTGGATTNNN
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAATGGGTATTGT---
------CCATTGTTNY
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CAATGGGTATTGT----
--------ATTGTTTAN
 T G A C G C T A C T G A C G A T C A T G C A T G A C T G G C A T C G T A C G A T C A G T A C T G G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C