Information for 17-TCWGCAATTCATT (Motif 30)

A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A C G T A G A C T C G A T A T C G A T G C C G A T C T A G C T G A
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.776
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.9 +/- 24.0bp
Average Position of motif in Background47.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCWGCAATTCATT----
-AATCAATTCAATAATT
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCWGCAATTCATT------
---NNCATTCATTCATNNN
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCWGCAATTCATT------
----NANTTCATTGAATTA
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCWGCAATTCATT-----
----ACATTCATGACACG
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCWGCAATTCATT---
ACAAGCAATTAATGAAT
 A C G T A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCWGCAATTCATT---
ACAAGCAATTAATGAAT
 A C G T A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCWGCAATTCATT-
----TAATTGATTA
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCWGCAATTCATT-----
--TNAATTTTATTACCTN
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Hoxd8/MA0910.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCWGCAATTCATT-----
-NAGCCATTAATTANTTA
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCWGCAATTCATT-----
-NAGCCATTAATTANTTA
 A G C T A G T C G C T A A T C G A T G C C G T A C T G A A C G T A C G T A G T C G T C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A