Information for 15-ATTTGACTTGGCT (Motif 25)

C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G A G T C A G T C C G T A C G T A A C T G A C G T G T A C C G T A G T C A C G T A A C G T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 19.4bp
Average Position of motif in Background45.9 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTTGACTTGGCT
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATTTGACTTGGCT
--TTGACTTTT--
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATTTGACTTGGCT-
---NNACTTGCCTT
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATTTGACTTGGCT
-------TTGGCA
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATTTGACTTGGCT--
------NTTGGCANN
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATTTGACTTGGCT-
NGATGACGTGGCAN
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTTGACTTGGCT
ATTTGAATT----
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATTTGACTTGGCT-
TGATGACGTGGCAN
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATTTGACTTGGCT--
-GATGACGTGGCANT
 C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGACTTGGCT--
AAATTCAAGTGGNTTN
 A C G T C G T A A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A