Information for 11-CCTTGTAATATAC (Motif 16)

A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
Reverse Opposite:
A C T G G A C T T C G A G A C T C T G A A G C T A G C T G T C A G T A C C G T A C G T A C A T G A T C G
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.684
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif113.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.9 +/- 21.4bp
Average Position of motif in Background46.3 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTTGTAATATAC
CTTTGT-------
 A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTTGTAATATAC
AACCTTATAT-----
 A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTTGTAATATAC-
---TCCAATCCACA
 A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C A C G T
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCTTGTAATATAC---
----SSAATCCACANN
 A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGTAATATAC
BNTGDCCTTG--------
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGTAATATAC
TGACCTTGAN------
 A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCTTGTAATATAC
TATAATTATAATATTC
 A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGTAATATAC
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGTAATATAC
TGACCTTGAV------
 A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CCTTGTAATATAC
AGGVNCCTTTGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C G C A T A C G T C A T G C A G T T C G A T C G A G A C T C T G A A G C T C T G A A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T