Information for 4-TCTCTTCTGGCAATAR (Motif 7)

G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
Reverse Opposite:
G A T C G A C T G T C A A G C T C G A T T A C G A T G C A G T C C G T A C A T G G C T A C G T A A C T G C G T A T A C G C T G A
p-value:1e-13
log p-value:-3.176e+01
Information Content per bp:1.692
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.4 +/- 23.0bp
Average Position of motif in Background34.1 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCTCTTCTGGCAATAR
---CTTCTGGGAAA--
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCTCTTCTGGCAATAR
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTCTTCTGGCAATAR
----TTCTTGGAAAN-
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTCTTCTGGCAATAR
---TTTCCAGGAAA--
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTTCTGGCAATAR
CATTGTTATGCAAAT--
 A C G T G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTTCTGGCAATAR
NNCTTTGTTTTGNTNNN--
 A C G T A C G T A C G T G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCTTCTGGCAATAR
CTTTGTTATGCAAAT--
 A C G T G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCTCTTCTGGCAATAR
------TTGGCA----
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCTCTTCTGGCAATAR
-----CTTGGCAA---
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCTCTTCTGGCAATAR
---CTTCCNGGAA---
 G A C T A G T C A C G T G T A C A C G T C G A T G A T C A C G T T A C G A T C G A G T C G C T A C T G A A C G T C T G A C T A G
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T