Information for 2-TGTSTACAKWCASWYW (Motif 5)

A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
Reverse Opposite:
G C A T C T A G G C A T T A C G C G A T A C T G G C A T T G C A C G A T C T A G G A C T C G T A A T G C C G T A G T A C C G T A
p-value:1e-14
log p-value:-3.384e+01
Information Content per bp:1.540
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif11.38%
Number of Background Sequences with motif1923.8
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets54.2 +/- 26.3bp
Average Position of motif in Background49.7 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGTSTACAKWCASWYW
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGTSTACAKWCASWYW
CAGATGTGCACATACGT---
 A C G T A C G T A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTSTACAKWCASWYW
NSTGTTTRCWCAGBNNN-
 A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTSTACAKWCASWYW
ATATTTACATA------
 A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTSTACAKWCASWYW
CNTGTTTACATA------
 A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTSTACAKWCASWYW
CBTGTTTAYAWW------
 A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGTSTACAKWCASWYW
TCCATGTTTACTTTG-----
 A C G T A C G T A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTSTACAKWCASWYW
SCTGTCARCACC------
 A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTSTACAKWCASWYW
NNTATANATATACN----
 A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTSTACAKWCASWYW
NNNTTTGTTTACATTTN----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T T A C G G A C T C T G A G A T C C G T A A C G T C G T A T G A C C G T A A T G C C G T A G A T C C G T A
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A A C G T A C G T A C G T A C G T