Information for 17-AGGCATGTTC (Motif 48)

C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
Reverse Opposite:
A T C G C G T A C G T A A G T C C G T A A C G T A C T G G T A C A G T C A C G T
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.878
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif48.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.6 +/- 22.2bp
Average Position of motif in Background51.9 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AGGCATGTTC
AAGGCAAGTGT
 A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCATGTTC
CNAGGCCT----
 A C G T A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCATGTTC
CTAGGCCT----
 A C G T A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGCATGTTC
TGGAATGT--
 C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGCATGTTC---
NNGTANTGTTTTNC
 A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGCATGTTC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGCATGTTC--
TGGCACGTGCCA
 C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C A C G T A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGGCATGTTC
ATGCCCGGGCATGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGCATGTTC--
TGGCACGTGCCG
 C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C A C G T A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGCATGTTC----
----CTGTTCCTGG
 C G T A A C T G A C T G A G T C G T C A C G A T A C T G A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G