Information for 2-TGCATATGGG (Motif 4)

A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
Reverse Opposite:
T G A C A T G C A G T C C G T A C G A T C G T A A G C T A C T G A T G C G T C A
p-value:1e-14
log p-value:-3.422e+01
Information Content per bp:1.823
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif152.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets57.9 +/- 23.6bp
Average Position of motif in Background50.8 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGCATATGGG
-ACATATGG-
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGCATATGGG
ACCATATGGT
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

NEUROD2/MA0668.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
ACCATATGGC
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

BHLHE22/MA0818.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
ANCATATGGT
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGCATATGGG
ATGMATATDC-
 A C G T A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
NACATATGGN
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
ANCATATGGT
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
ANCATATGTT
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCATATGGG
ACCATATGGT
 A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGCATATGGG
ATTTGCATAT---
 A C G T A C G T A C G T A C G T A T C G G T A C T C G A C G A T C G T A A C G T C T A G A T C G A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T