Information for 11-AGACTTTGTGTGG (Motif 28)

C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G
Reverse Opposite:
T G A C A G T C G T C A G A T C T G C A A G T C G C T A C G T A C T G A A C T G C G A T A T G C C G A T
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.656
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif302.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets42.0 +/- 25.5bp
Average Position of motif in Background49.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGACTTTGTGTGG
---CTTTGT----
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGACTTTGTGTGG----
-----NNHTGTGGTTWN
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGACTTTGTGTGG--
ANTCCTTTGTCTNNNN
 A C G T C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGACTTTGTGTGG----
---CTTCGTGGGGGGTC
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGACTTTGTGTGG----
-NNNNTTGTGTGCTTNN
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGACTTTGTGTGG-
----TGGGTGTGGC
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGACTTTGTGTGG---
-----GTCTGTGGTTT
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGACTTTGTGTGG
---CCATATATGG
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G
A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGACTTTGTGTGG
BCAGACWA-------
 A C G T A C G T C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGACTTTGTGTGG--
---NTGGGTGTGGCC
 C G T A T A C G C G T A T G A C G A C T G C A T C G A T T A C G A C G T C A T G C A G T T C A G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C