Information for 10-TKCCCACTTMRGT (Motif 23)

A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C G A C T A C T G C G T A C G T A A C T G A C G T C T A G A C T G A C T G G T C A C G T A
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 26.8bp
Average Position of motif in Background45.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TKCCCACTTMRGT
--ACCACTTGAA-
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TKCCCACTTMRGT
--ACCACTTAA--
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TKCCCACTTMRGT
--ACCACTTAA--
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TKCCCACTTMRGT--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TKCCCACTTMRGT
---CCACTTGAA-
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TKCCCACTTMRGT--
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TKCCCACTTMRGT
--NSCACTYVAV-
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TKCCCACTTMRGT
ATGCCCACC-----
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TKCCCACTTMRGT
--RSCACTYRAG-
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TKCCCACTTMRGT
---GCACTTAA--
 A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T T G A C C T G A A C T G A C G T
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T