Information for 10-TTTTCATGTAAAWGAG (Motif 22)

A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
Reverse Opposite:
G T A C G A C T A G T C G C T A A C G T C G A T A C G T T G C A A G T C C G T A C G A T C T A G C T G A C G T A C G T A C G T A
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.779
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 30.5bp
Average Position of motif in Background44.9 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTCATGTAAAWGAG
ATTTGCATAACAATG--
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
CTTTGTTATGCAAAT---
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
AATATACATGTAAAACA-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
TAAATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTTTCATGTAAAWGAG
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
GGTTGCCATGGCAA----
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCATGTAAAWGAG
ANTTNTACATGTANTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
AATATACATGTAATATA-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTTCATGTAAAWGAG
AATATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A C T G A C G T G T C A C G T A T C G A C G A T A C T G C T G A A C T G
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T