Information for 1-TTAAKGCAAGTCTGAY (Motif 2)

A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
Reverse Opposite:
C T G A G A C T T A G C C G T A A C T G C G T A T A G C A G C T A G C T C A T G A G T C G T C A A C G T A C G T C G T A T G C A
p-value:1e-15
log p-value:-3.515e+01
Information Content per bp:1.747
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.9 +/- 21.0bp
Average Position of motif in Background48.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTAAKGCAAGTCTGAY
--AAGGCAAGTGT---
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAAKGCAAGTCTGAY
MTGATGCAAT------
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTAAKGCAAGTCTGAY
-TTATGCAAAT-----
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAAKGCAAGTCTGAY
ATGATGCAAT------
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAAKGCAAGTCTGAY
NATGTTGCAA-------
 A C G T A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTAAKGCAAGTCTGAY
-ATATGCAAATNNN--
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTAAKGCAAGTCTGAY
-TTATGCAAT------
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTAAKGCAAGTCTGAY
RTTATGYAAB------
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTAAKGCAAGTCTGAY
-CCTTGCAATTTTTNN
 A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTAAKGCAAGTCTGAY
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T T G C A C G T A C A G T A C T G G T A C C T G A C T G A A C T G A C G T A G T C A C G T A C T G C G T A A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T