Information for 6-GTCATATTATCTKGCT (Motif 13)

C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
Reverse Opposite:
T G C A A T C G T A G C G T C A C G T A A C T G T G C A C G A T C T G A G T C A G A C T C T G A A C G T C T A G G T C A G A T C
p-value:1e-13
log p-value:-3.000e+01
Information Content per bp:1.707
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 19.9bp
Average Position of motif in Background28.7 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT
GTCATN----------
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCATATTATCTKGCT
TNTTATCTTATCTT---
 A C G T C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT--
--NGANTTTTATGGCTCN
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T A C G T A C G T
A C G T A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCATATTATCTKGCT
GTCACGCTCNCTGA--
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT
----TCTTATCT----
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT-
------TTTTATGGCTN
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTCATATTATCTKGCT
AGTCACGC---------
 A C G T C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT
----YSTTATCT----
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTCATATTATCTKGCT
GKVTCADRTTWC------
 A C G T A C G T C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GTCATATTATCTKGCT
-----NTTTTATGAC-
 C A T G A C G T A G T C C G T A A G C T C G T A A C G T A G C T C G T A A C G T T G A C A C G T A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T