Information for 4-ACCATTTTATCAC (Motif 5)

G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C
Reverse Opposite:
T C A G A C G T A T C G C G T A G A C T C G T A C G T A C T G A C G T A G A C T C T A G C A T G C A G T
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.700
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets60.2 +/- 20.2bp
Average Position of motif in Background48.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ACCATTTTATCAC
---NTTTTATGAC
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ACCATTTTATCAC-
---NTTTTATTACN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T
A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:ACCATTTTATCAC--
----TTTTATGGCTN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACCATTTTATCAC
----TTTTATTGC
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ACCATTTTATCAC
---TTTTTATTGC
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C
A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACCATTTTATCAC---
TNAATTTTATTACCTN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACCATTTTATCAC----
-NAATTTTATTACCNNN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACCATTTTATCAC----
-NAATTTTATTACCTNN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T A C G T A C G T A C G T
A C G T C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACCATTTTATCAC
---NTTTTATTGG
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:ACCATTTTATCAC-
----TTTTATTRGN
 G T C A G T A C G A T C C T G A A C G T A G C T G A C T G A C T C T G A C G A T T A G C T G C A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A