p-value: | 1e-5 |
log p-value: | -1.219e+01 |
Information Content per bp: | 1.701 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 69.3 +/- 5.2bp |
Average Position of motif in Background | 81.8 +/- 16.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0117.1_Nkx3-1/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAGTACTGAT--- TACTAAGTACTTAAATG |
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PB0096.1_Zfp187_1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGTACTGAT-- TTATGTACTAATAA |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACTGAT-- ACTCCAAGTACTTGGAA |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAGTACTGAT-- CNTTAAGTACTTAANG |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGTACTGAT-- NATTTAAGTACTTNAAA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGTACTGAT AAGCACTTAA |
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PH0061.1_Hoxb6/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGTACTGAT- NNNGTAATTACNNATA |
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HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAGTACTGAT-- --NTATYGATCH |
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PH0008.1_Barx2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACTGAT- TAAGTAATTAGTTATA |
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PB0141.1_Isgf3g_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGTACTGAT---- NNGTANTGTTTTNC |
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