Information for 14-GHTGCAGAGRAST (Motif 32)

T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
Reverse Opposite:
C T G A A T C G C G A T A G T C G T A C A C G T G T A C C G A T C A T G G T A C C G T A C G A T A G T C
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.640
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif821.4
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets44.8 +/- 25.2bp
Average Position of motif in Background48.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GHTGCAGAGRAST
WATGCAAATGAG-
 T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GHTGCAGAGRAST
ATATGCAAATNNN-
 A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GHTGCAGAGRAST
TATGCWAATBAV-
 T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GHTGCAGAGRAST-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GHTGCAGAGRAST
-ATGMATATDC--
 T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GHTGCAGAGRAST
CAATTGCAAAAATAT
 A C G T A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GHTGCAGAGRAST
TTATGCAAAT----
 A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GHTGCAGAGRAST
ATATGCAAAT----
 A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GHTGCAGAGRAST
NNNANTGA--------
 A C G T A C G T A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GHTGCAGAGRAST
TTGTATGCAAATTAGA
 A C G T A C G T A C G T T C A G G C A T A C G T A C T G G T A C C G T A C A T G T G C A A C T G T C A G C G T A T A G C G A C T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A