Information for 11-TTTGCACAAAACC (Motif 26)

A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G A T A C G T A C G T C T A G A C G T A C T G G T A C C T G A C G T A C G T A
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 18.0bp
Average Position of motif in Background48.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTGCACAAAACC
ATTGCACAATA--
 A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTGCACAAAACC
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTGCACAAAACC
ATTTGCATAA----
 A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACAAAACC
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACAAAACC
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACAAAACC
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCACAAAACC-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTTGCACAAAACC
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGCACAAAACC
GTTGCGCAAT---
 A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTGCACAAAACC-
TTTGCACACGGCAC
 A C G T A C G T A G C T A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C