Information for 15-TGTKGTCATGGCAACT (Motif 23)

G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
Reverse Opposite:
C T G A A C T G C G A T A C G T A C T G G T A C G T A C C G T A C G A T C T A G G T C A T A G C G T A C C G T A A T G C C T G A
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.736
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 23.8bp
Average Position of motif in Background28.7 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
KGTTGCCATGGCAAC-
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT-
-GTTGCCATGGCAACCG
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T A C G T
A C G T C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
--TTGCCATGGCAACC
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGTKGTCATGGCAACT
-GTTGCCATGGCAAC-
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

RFX2/MA0600.2/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
CGTTGCCATGGCAACG
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

RFX5/MA0510.2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGTKGTCATGGCAACT
CGTTGCCATGGCAACG
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
CGTTGCCATGGCAACN
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
--TTGCCATGGCAACN
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

RFX4/MA0799.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
CGTTGCCATGGCAACN
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGTKGTCATGGCAACT
-----NNTTGGCANN-
 G A C T A T C G C G A T C A T G A T C G A C G T A G T C C G T A A C G T C A T G A C T G G T A C C G T A C G T A G T A C A G C T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T