Information for 9-TGTGGTATCAGGCYTG (Motif 13)

C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A T C A G A T G C G T A C C G A T A T C G G C T A A G C T T C G A A T G C T G A C G T C A T G A C C G T A
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 19.3bp
Average Position of motif in Background80.8 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
GATGGGGTATCATTTTT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
AATGGGGTATCACGTTT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
AATAGGGTATCAATTAT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGTGGTATCAGGCYTG-
---------AGGCCTNG
 C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
AATAGGGTATCAATATT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
GATAGGGTATCACTAAT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
GATAGGGTATCACTAAT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGTGGTATCAGGCYTG-
--------CAGGTGAGG
 C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TGTGGTATCAGGCYTG-
---------AGGTGTGA
 C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTATCAGGCYTG
AATAGGGTATCATATAT-
 A C G T A C G T C G A T A C T G C A G T A C T G A T C G A C G T C T G A C G A T A T G C C G T A A C T G A T C G A G T C A G C T A C G T A C T G
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T A C G T