Information for 6-CWCGYGCCCC (Motif 7)

T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
Reverse Opposite:
A T C G C T A G A C T G C A T G G T A C C T G A A T G C A C T G G C A T A C T G
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.667
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif803.5
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets56.3 +/- 26.0bp
Average Position of motif in Background47.2 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfl5/MA0632.1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
GGCACGTGCC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
GACACGTGCC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
ATCACGTGAC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
GGCACGCGTC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CWCGYGCCCC
GGCACGTGNC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
ATCACGTGAC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CWCGYGCCCC
KCACGTGMCN-
 A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CWCGYGCCCC
NCACGTGACN-
 A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CWCGYGCCCC
ACCACGTGCC--
 A C G T A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CWCGYGCCCC
TCACGTGACC-
 A C G T T G A C C G T A A G T C A T C G G A C T A C T G G T A C T G A C A G T C A T G C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T